Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX469528: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-320258' containing sample 'DAR3144'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 838.4M bases, 397.7Mb downloads

UUID: 48167402-9767-45b4-bf1a-351c0346b836

Design: Illumina sequencing of Staphylococcus aureus DAR3144 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA USA100

PRJNA228367 • SRP037610 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus DAR3144

SAMN02403829 • SRS556773 • All experiments • All runs

Organism: Staphylococcus aureus DAR3144

Library:

Name: Pond-320258

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 475169.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5DHJA

material_type: DNA:DNA Somatic

product_order: PDO-2554

product_part_number: P-MCV-0001

project: G54929

research_project: RP-506

root_sample_id: SM-4P9ER

sample_id: SM-5DHJA

work_request: 40067

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 838.4M bases, 397.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1167793	1,956,206	395.2M	187Mb	2014-02-11
SRR1172483	2,194,043	443.2M	210.8Mb	2014-02-19

ID:: 649716

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